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Data for the figures:
Data for the clusters presented within the paper are available here as text tab-delimited cluster files. The data represent normalized, background-corrected log2 values of the Red/Green ratio measured on each microarray. These downloadable data files can be viewed on IBM PC-compatible computers using Treeview, a publicly available software package written by Michael Eisen.

Raw data:
Raw data for all yeast genome microarrays used in this study are available from the Stanford Microarray Database. For each microarray, two scan files (TIF files) were generated, one for each fluorescence emission wavelength corresponding to the fluorophor used in the reverse transcription labeling reaction (i.e. Cy3-dUTP = 532 nm, Cy5-dUTP = 632 nm). Image analysis for each array was performed on IBM PC-compatible computers using ScanAlyze, and included a semi-manual gridding process whereby the spots were identified in a grid file. The extracted data files are available as compressed text tab-delimited ScanAlyze output files.

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